BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B04SP1|AL426955
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1698 0.0
>3x_Contig1800
Length = 38778
Score = 1698 bits (854), Expect = 0.0
Identities = 889/898 (98%), Gaps = 4/898 (0%)
Strand = Plus / Plus
Query: 1 atcaaacatcaatcgcatagttaactctggctaagtgcatcactagtgaagttaccttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23834 atcaaacatcaatcgcatagttaactctggctaagtgcatcactagtgaagttaccttaa 23893
Query: 61 cgattaawatttctcayagaaaatacatataatttcaatgaccgttactgctgctccaga 120
||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23894 cgattaaaatttc-cacagaaaatacatataatttcaatgaccgttactgctgctccaga 23952
Query: 121 acaatcttacgttttccaagctgccatcgataagactggtacccaggttgttggtggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23953 acaatcttacgttttccaagctgccatcgataagactggtacccaggttgttggtggtaa 24012
Query: 181 aggtgtccgtatcgacatcgaaagagacggtaaggtttacaagaacattttggatgccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24013 aggtgtccgtatcgacatcgaaagagacggtaaggtttacaagaacattttggatgccat 24072
Query: 241 cactggtgctgctgtcggtgctattggctgggctgacgaagaagctcttgawattatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 24073 cactggtgctgctgtcggtgctattggctgggctgacgaagaagctcttgaaattatcaa 24132
Query: 301 caaagctgcccttgagtccacttactcttacccatgcttgatctccaacaagaatgctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24133 caaagctgcccttgagtccacttactcttacccatgcttgatctccaacaagaatgctga 24192
Query: 361 aaaattggccaagttctacatcgacaactctccagaaggtgcctttgcctctgccttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24193 aaaattggccaagttctacatcgacaactctccagaaggtgcctttgcctctgccttgtg 24252
Query: 421 gtgtacttctggttctgaaagtaacgaaaacgctttgagaatcgtcagacaatactactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24253 gtgtacttctggttctgaaagtaacgaaaacgctttgagaatcgtcagacaatactactt 24312
Query: 481 agaacgtggtcttccaaagaagttgaagttgatctccagagaggactcctaccatggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24313 agaacgtggtcttccaaagaagttgaagttgatctccagagaggactcctaccatggttt 24372
Query: 541 cactttgggtgctcaatccatctctaacaacccaagaatcgagaaattcaaggattactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24373 cactttgggtgctcaatccatctctaacaacccaagaatcgagaaattcaaggattactt 24432
Query: 601 cattgaccagaagaacatctgtttgtcaatgccaagtgcttacacataccgtaacaagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24433 cattgaccagaagaacatctgtttgtcaatgccaagtgcttacacataccgtaacaagtt 24492
Query: 661 gaagtcggaatccgaagaagactacgccaaccgtttgctaaagatcttggaagacaagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24493 gaagtcggaatccgaagaagactacgccaaccgtttgctaaagatcttggaagacaagat 24552
Query: 721 catcactgaagatccagacaccgttgctgctgtcatcgtcgaaactttgccaggttcctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24553 catcactgaagatccagacaccgttgctgctgtcatcgtcgaaactttgccaggttcctc 24612
Query: 781 cttgggtaccactccaccaccaaaagggttacttgaaggggtatcagagacttgtgtaac 840
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 24613 cttgggtaccactccaccacc-aaagggttacttgaa-gggtatcagagacttgtgtaac 24670
Query: 841 aaatacgacatcattttctaccttgacgaa-tmttgtgtggtaccggtagatgcaacc 897
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 24671 aaatacgacatcattttctaccttgacgaagtcatgtgtggtaccggtagatgcaacc 24728
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6102
Number of Sequences: 1807
Number of extensions: 6102
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)